Author profile

Scott Edmunds

Editor in Chief of GigaScience and Chief Editor of GigaByte. Data nerd based at BGI Hong Kong. Co-founder of Open Data and Citizen Science organisations CivicSight, CitizenScience.Asia and Bauhinia Genome.

A step-by-step guide to 3D print a scientific publication.

- March 9, 2021

To promote re-use of microCT data and 3D models we have produced a video guide on how to 3D print a scorpion from GigaDB in 10 simple steps.

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Guest Posting: Help Crowdfund the Transbiome

- March 2, 2021

transbiome

A guest posting with the Transbiome team on their community driven research program using crowdfunding and co-creation to discover the diversity of the neo-vaginal microbiome.

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GigaByte and River Valley Technologies push the boundaries of Executable Research Articles using Stencila and Code Ocean

- February 25, 2021

Executable Research Article

Today GigaByte publishes its first Executable Research Article (ERA), using technology from Stencila and Code Ocean to showcase interactive and executable versions of the figures.

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Play it again, SAMtools. Q&A with the SAMtools team on 12 years of providing bioinformatics “glue”

- February 17, 2021

SAMtools paper

Today we publish the first update in 12 years describing what’s new in SAMtools, and for the first time the associated BCFtools and HTSlib software library. Here is a Q&A with the authors.

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Ukraine Genome Survey Adds Missing Pieces to Human Diversity Puzzle

- January 13, 2021

Ukraine Genome logo

The Ukraine Genome Project finds quarter of the genetic variation in Europe, dramatically increasing information on population diversity and medical genetics.

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Cracking sex chromosome evolution via egg-laying birds and mammals

- January 7, 2021

sex chromosome duck genome

Ducks, Emu’s, Platypus and Echidna’s, oh my! New work on the duck and other egg-laying animal genomes helps crack sex chromosomes evolution and diversity in a number of bird and monotreme species.

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iPhone Genomics: beaming us up to the “tricorder” era

- December 8, 2020

tricorder

The 1st comprehensive mobile genome analysis application, iGenomics, is now available for use on an iphone. By pairing an smartphone with a handheld DNA sequencer, users will be able to create a mobile genetics laboratory, reminiscent of the Star Trek’s tricorder.

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Q&A with Parice Brandies on the Antechinus Genome

- November 25, 2020

antechinus genome

Parice Brandies presents a Q&A and video on her GigaByte paper on the brown antechinus genome (Antechinus stuartii), a fascinating marsupial with many biological surprises to explore.

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COVID-19 Data-Sharing Hero Wins GigaScience Prize

- November 11, 2020

ICG-15 Prize

Prof Zhang Yongzhen is winner the 2020 ICG-15 GigaScience Prize for Outstanding Data Sharing during the COVID-19 Pandemic. Last month was the 10th year we’ve attended our co-publisher BGI’s annual ICG (International Conference on Genomics) gathering, and the 3rd time we have presented a prize at the meeting.

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Accessing and reviewing Controlled Access Data of Rare Cancers. Q&A with Matthieu Foll

- November 4, 2020

Controlled Access Data

We have a Q&A with author Matthieu Foll from the WHO/(IARC on his new GigaScience paper presenting multi-omic data from rare lung neuroendocrine neoplasms and his experience having the precious Controlled Access data peer reviewed by named peer reviewers.

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