Tag Archives: open science

Giga Gets Bigger: GigaByte kickstarts GigaScience Press

- September 4, 2020

GigaScience Press launches

GigaScience has spawned a new smaller and more agile sibling: GigaByte, and is the first journal to come from our new GigaScience Press.  This bigger and better GigaScience family has lead to some changes in GigaScience, and we are pleased to make some important announcements about the team. Coming shortly after our 8th birthday, GigaScience […]

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Reproducible Classification. Q&A on ShinyLearner & the CODECHECK certificate, pt. 2

- April 8, 2020

ShinyLearner

This week we showcased a new way of peer reviewing software, testing code in an independent manner and providing a CODECHECK “certificate of reproducible computation” when the results in the paper can be reproduced. We’ve written a post on the CODECHECK process featuring a Q&A with CODECHECK founder Stephen Eglan, and here we’ll provide a follow […]

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Certified Reproducibility. Q&A on ShinyLearner & the CODECHECK certificate, pt. 1

- April 7, 2020

CODECHECK certificate

Out today in GigaScience is ShinyLearner, a new tool to make it easier to perform benchmark comparisons of classification algorithms. This tool stands out by making this process super systematic and reproducible, and despite needing to interface with many different libraries and languages it uses software containers (and a CodeOcean demo) so end users don’t […]

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iMicrobe: Fostering Community-Driven Science and Data Discovery. Q&A with Bonnie Hurwitz

- August 2, 2019

In this data-driven era, research is faced with new challenges, from sharing, storing and accessing data, including how to better integrate data to answer big questions in science. With many data repositories available, it is hard to maintain them all – some repositories are forced to close – meaning loss of access to invaluable datasets.  […]

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Power to the People and Their Data – The Open Humans Way. Q&A with Bastian Greshake Tzovaras and Mad Price Ball

- June 27, 2019

In the data driven era, not only in research but in our day-to-day lives, people are creating more and more personal digitized data that enables human-participant research in social sciences and personalized medicine. However, with numerous data streams and types this raises concerns such as how to merge and share such data, as well as […]

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GigaBlog meets Gigantum: Guest Post from Tyler Whitehouse, Dean Kleissas and Dav Clark

- June 20, 2019

At GigaScience as our focus is on reproducibility rather than subjective impact, it can be challenging at times to judge this in our papers. Targeting the “bleeding edge” of data-driven research, more and more of our papers utilise technologies, such as Jupyter notebooks, Virtual Machines, and Containers such as Docker. Working these tools in to […]

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Citizen Science goes mainstream. Back at the UN with the Citizen Science Global Partnership.

- March 29, 2019

Citizen Science at UNEA4

Citizen Science at UNEA4 As GigaScience has the aim of opening and democratising science as far as it can go, we even work towards the involvement of non-professional “citizen scientists” in the scientific process. Regular readers of this blog and journal will have seen the many crowdfunded and educational community genome projects we have promoted […]

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Preprint.Space, The Final Frontier

- May 24, 2018

Preprint.Space logo

Open Science Trek, The Next Integration Fostering and promoting more open and transparent science is one of the goals of GigaScience, and to do this we have been big promoters of open peer review as well as preprints servers. Combining both of these, Academic Karma was the one of the first platforms to focus on […]

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… and a Happy New Year

- December 19, 2017

The year is almost over and it’s time to review the highlights of GigaScience’s 2017. 2017 was as special year for GigaScience: a year of many firsts and we celebrated our 5th birthday! An occasion to look back – and forward, as we did in our anniversary editorial. We marked the completion of our first […]

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Citizen Smith goes to Nairobi. Taking Citizen Science to the UN

- December 15, 2017

GigaScience utilizes and promotes Open Science in all its forms, and one of the key areas in this ecosystem is Citizen Science – opening and democratising science to such an extent it is powered by public participation. Regular readers of this blog and journal will have seen our promotion of many crowdfunded and educational community […]

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