Tag Archives: big data

How Green Became the New Black – Plant Phenotyping Developments Down Under

- July 17, 2018

Plant phenotyping

With the upcoming 5th International Plant Phenotyping Symposium (IPPS) set to take place Oct 2-5, in Adelaide, Australia, we look at how the plant phenotyping community has progressed over the last decade and how we can potentially address the issues surrounding data sharing, re-use, and reproducible research. As we live in an increasingly data-driven era, […]

Continue reading

0 comments

Guest Blog from Huanming Yang on using the human genome for big-data storage

- September 7, 2017

With the current annual data creation rate estimated to be in the tens of zettabytes, the flood of information currently being generated in every area of human life is crashing up against limited data storage solutions. However, DNA, which serves as a storage system for biological information, has been proposed as a potential means to […]

Continue reading

1 comment

A Passion for Morphing Passiflora Leaves: Author Q&A with Daniel Chitwood

- May 4, 2017

Passiflora, commonly known as Passion Vines or Passion Flowers is a genus encompassing around 500 species, all of which exhibit such huge variation in leaf shape.  To further understand the unique diversity of Passiflora leaves, a recent paper published in GigaScience, presents a morphometric analysis and unique open dataset encompassing over 3,300 leaves from 40 […]

Continue reading

0 comments

Jack Rabbits, Lizards and Squirrels, Oh My! Q&A with Taylor Noble

- September 29, 2016

Here is a Q&A with the first author of our first camera trap dataset published in our Data-Intensive Ecology series. Taylor shares his thoughts on why he’s so interested in the endangered blunt-nosed leopard lizard, the usefulness of camera traps in ecology, as well as challenges with big data.

Continue reading

0 comments

Guest posting: Building a PhenoMeNal metabolomics e-infrastructure

- July 19, 2016

David Johnson and the PhenoMeNal consortium have a guest posting on their efforts in building an open, community-supported, e-infrastructure for medical metabolomics data, and how they are seeking community feedback on the requirements for the data infrastructures needed.

Continue reading

0 comments

The Complexities of Modern Plant Phenomics: A Guest Blog by our Plant Phenomics Series Guest Editors

- June 7, 2016

Here, four enthusiastic Guest Editors (Rubén Rellán Álvarez, Guillaume Lobet, Malia Gehan and Srikant Srinivasan) of our “Plant Phenomics: Data Integration & Analysis” series, have got together and share their insights on the current status of Plant Phenomics research.

Continue reading

1 comment

Big Data Challenges and Solutions in Contemporary Ecology: A Guest Blog by Chris Lortie

- April 26, 2016

Chris Lortie

Chris Lortie is an integrative ecologist (NCEAS, Santa Barbara, USA and York University, Canada)  and is a co-Guest Editor of our Data-Intensive Ecology series. Here, he shares his views on a few challenges and solutions in contemporary ecology as the field moves into the big-data era.

Continue reading

0 comments

Open Science Resources for Contributing to Brain Imaging Research: A Guest Blog by Cameron Craddock

- March 15, 2016

In support of Brain Awareness Week, we have asked Cameron Craddock, Director of the Computational NeuroImaging Lab, Nathan S. Kline Institute for Psychiatric Research and Director of Imaging, Child Mind Institute, to write a blog highlighting open science in neuroimaging, and to announce our upcoming publication of the 2015 Brainhack Proceedings and the Brainhack Thematic Series. BioMed Central are also highlighting some of the amazing benefits of brain research and showcasing the progress being made by researchers around to world. Learn more here.

Continue reading

0 comments

GigaMetabolomics Strikes Again: More BYO Data Parties and a Thematic Series

- March 13, 2016

The genomics community has been held up as an exemplar in data sharing practices since the human genome project, but the metabolomics community is catching up fast, with the Metabolights database being the fast growing repository at the EBI. In this light, GigaScience has been actively involved in reaching out and engaging with the metabolomics […]

Continue reading

0 comments

We Wish You a GigaChristmas: A 2015 Wrap-Up

- December 14, 2015

Last Christmas we gave you our heart; okay forget George Michael – we gave you beautiful imaging data sets, Virtual Machines, BYO data parties, GigaGitHub, more open peer review plus much more. However, in 2015 GigaScience has delivered anything but less, with more technical developments and exemplar papers published – GigaScience continues to push the […]

Continue reading

0 comments