Tag Archives: genome assembly
A visit from the Oriental Stork
Hans Zauner - October 23, 2024
This week in GigaScience we published a new genomic analysis of the endangered Oriental Stork, bringing good news: The population’s genetic health is still surprisingly strong, with high genetic diversity and low levels of inbreeding. Climate change, forest wildfires, hunting and the expansion of agriculture, industry and other human activities threaten the Oriental Stork (Ciconia […]
Amazonian Morpho butterflies: three genomes with a twist
Hans Zauner - May 25, 2023
First full-length genome sequences for three species of Morpho butterflies show inversions on the Z chromosome.
The Genome of a Gentle Giant
Scott Edmunds - October 14, 2022
Researchers have published a new chromosome scale reference genome for the Aldabra giant tortoise, providing a much needed genetic resource for rescue and rewilding efforts.
Play it again, SAMtools. Q&A with the SAMtools team on 12 years of providing bioinformatics “glue”
Scott Edmunds - February 17, 2021
Today we publish the first update in 12 years describing what’s new in SAMtools, and for the first time the associated BCFtools and HTSlib software library. Here is a Q&A with the authors.
Q&A with Parice Brandies on the Antechinus Genome
Scott Edmunds - November 25, 2020
Parice Brandies presents a Q&A and video on her GigaByte paper on the brown antechinus genome (Antechinus stuartii), a fascinating marsupial with many biological surprises to explore.
Nectar, fruits, and blood. A genomic view on the feeding habits of bats.
Hans Zauner - June 9, 2020
Bats are mammals like no other – airborne, mostly nocturnal, often hidden away in caves, capable of using echolocation for in-flight navigation. No two bat species are alike, however. Their diversity of morphology, life styles and feeding habits is staggering. New bat genomics research published today in GigaScience explores the footprints of evolution, to explain […]
The genome of an elusive giant
Hans Zauner - January 16, 2020
Hear more on how an international team led by researchers at the University of Copenhagen has sequenced the elusive giant squid genome.
Genomic Warning Flag Just in Time for Beach Season: Jellyfish Toxins
Nicole Nogoy - July 4, 2019
Three jellyfish genomes are better than one A new article in GigaScience might make you squirm if you plan to hit the beach this summer. The published work presents the draft genomes of three different jellyfish species. The international group of researchers, lead by Joseph Ryan (University of Florida), chose to examine jellyfish that present a […]
Genomes from paradise
Hans Zauner - January 30, 2019
New genomic data from five birds-of-paradise reveal genes that are shaped by selection and help explain the origin of their spectacular plumage. Birds-of-paradise, with their elaborate and colorful feathers and their complex courtship displays, are a school-book example of sexual selection. However, little is known about the genetic variants that distinguish the lavishly colored birds-of-paradise […]
Genomes mite surprise you
Hans Zauner - November 19, 2018
In GigaScience, Benjamin Makepiece and his co-authors from Liverpool present genome assemblies of two trombidid mite species, the itch-inducing chigger mite and its more benign cousin, the velvet mite. The bite of the chigger mite can transmit a life-threatening bacterial disease, scrub typhus. When the authors explored the gene content of the mites’ genomes, searching clues for […]