Tag Archives: open data
Biocuration on the Bund
Mary Ann Tuli - April 16, 2018
GigaScience are regular attendees of the International Biocuration Conference, and you may have read our write-ups ups going back to 2012 edition. This year Biocuration is back behind the bamboo curtain, with the 11th conference held in the Crowne Plaza Hotel Shanghai from April 8th-11th and hosted by Fudan University. Symbolised by the spectacular Bund waterfront, […]
Interact with the Crabs in Your Computer: New GigaDB Imaging Widgets
Scott Edmunds - March 15, 2018
Interactive, downloadable and 3D printable scans of newly discovered hermit crabs are now available in GigaDB using MicroCT technology data. In this latest GigaBlog we let you inspect this data too, as well as provide a Q&A with the first author Jannes Landschoff on its potential utility. A study just published in GigaScience showcases new […]
CUDDELing up to metabolomics in Hong Kong
Peter Li - January 22, 2018
As mentioned in our Happy New Year blog post, one of the highlights in 2017 was a second GigaScience hackathon workshop which we held in November last year in our Hong Kong BGI office. Funding for this workshop came from a project we have called CUDDEL which was awarded a grant by the BBSRC from their China […]
Citizen Smith goes to Nairobi. Taking Citizen Science to the UN
Scott Edmunds - December 15, 2017
GigaScience utilizes and promotes Open Science in all its forms, and one of the key areas in this ecosystem is Citizen Science – opening and democratising science to such an extent it is powered by public participation. Regular readers of this blog and journal will have seen our promotion of many crowdfunded and educational community […]
Research Parasites Wanted. Q&A with Casey Greene & Brian Byrd
Scott Edmunds - September 14, 2017
As a journal focussed on open science we are big promoters of research parasites (and research on parasites), and try to feeds them with open data and tools. It is therefore appropriate this is the second year GigaScience has supported and sponsored the Research Parasite awards. In one of our Q&As, organisers Casey Greene and […]
Bohemian Bashfully. Baroque birthdays and bingo in Prague.
Scott Edmunds - July 31, 2017
Every summer we celebrate our birthday at the ISMB (Intelligent Systems for Molecular Biology) conference, and this was a particularly memorable and important one – being the 5th birthday of GigaScience, and 25th edition of the ISMB. Having ISMB in Prague this year, the historic capital of old Bohemia was particularly appreciated by the attendees, […]
A Passion for Morphing Passiflora Leaves: Author Q&A with Daniel Chitwood
Nicole Nogoy - May 4, 2017
Passiflora, commonly known as Passion Vines or Passion Flowers is a genus encompassing around 500 species, all of which exhibit such huge variation in leaf shape. To further understand the unique diversity of Passiflora leaves, a recent paper published in GigaScience, presents a morphometric analysis and unique open dataset encompassing over 3,300 leaves from 40 […]
2016: An Eventful Year for GigaScience
Nicole Nogoy - December 13, 2016
This year has been an eventful one, probably too eventful for many. For GigaScience it has been eventful too, although fortunately in a much more positive way than many have experienced. While there are fears of us entering a “post-truth” era, there is more need than ever for our role as promoters of transparency, reproducibility and providers of cold-hard data. We celebrated our birthday with Mickey Mouse, and experienced many other milestones. On the technical front, this year we have brought you better integration with citable and updatable methods, bigger better and broader data types, and much more. In the tradition of end-of-year-introspection, here is a summary of some of our 2016 achievements as we continue to push the boundaries of innovative publishing of all research objects and reproducible research.
Ginkgo genome fills an evolutionary hole
Scott Edmunds - November 25, 2016
New in GigaScience is an article that presents the genome sequence of Ginkgo biloba, the oldest extant tree species. The research was carried out by a team of scientists at BGI, Zheijiang University and the Chinese Academy of Sciences, who tackled and analyzed an exceptionally large genome, totalling more than 10Gb. Ginkgo is considered by some as a “living fossil”, its form and structure having changed very little in 270 million years. Its unique position in the evolutionary tree of life means the ginkgo genome will provide an extensive resource for studying early events in tree development and evolution.
Remember Remember, It’s Neuro-November!
Nicole Nogoy - November 1, 2016
Halloween may be over, but this November GigaScience will be continuing to fight the zombie (paper) apocalypse and binge on sweet sweet brains (research outputs).