Tag Archives: open data
Open imaging data to assist AI in the COVID-19 fight. Q&A with Dominic Cushnan
Scott Edmunds - November 25, 2021
We have an author Q&A with Dominic Cushnan, Head of Artificial Intelligence (Imaging) for NHSX, on his Data Note on the National COVID-19 Chest Imaging Database.
GigaByte call for data papers describing datasets on vectors of human diseases
Scott Edmunds - November 17, 2021
GigaScience Press partnering with GBIF are supported by TDR (hosted at the wHO), to release a special issue for publication of new datasets presenting biodiversity data for research on vectors of human diseases.
Update on Updates. GigaByte’s new article type to speed up science
Scott Edmunds - June 15, 2021
We have an update on the Update article, GigaByte’s new article type to speed up the sharing and communication of science through allowing publication of data and software versions that are immediately useful to the community.
Changing the Culture of Data Management and Sharing: A Report on the NASEM Workshop
Chris Armit - May 26, 2021
The National Academies of Sciences, Engineering, and Medicine (NASEM) hosted the virtual workshop “Changing the Culture of Data Management and Sharing”. Here we have a write-up of the event.
Ukraine Genome Survey Adds Missing Pieces to Human Diversity Puzzle
Scott Edmunds - January 13, 2021
The Ukraine Genome Project finds quarter of the genetic variation in Europe, dramatically increasing information on population diversity and medical genetics.
COVID-19 Data-Sharing Hero Wins GigaScience Prize
Scott Edmunds - November 11, 2020
Prof Zhang Yongzhen is winner the 2020 ICG-15 GigaScience Prize for Outstanding Data Sharing during the COVID-19 Pandemic. Last month was the 10th year we’ve attended our co-publisher BGI’s annual ICG (International Conference on Genomics) gathering, and the 3rd time we have presented a prize at the meeting.
Guest Blog: Data in the time of Coronavirus, Pt. 2
Scott Edmunds - April 12, 2020
With ongoing the 2020 COVID-19 pandemic providing us with unprecedented insight into the progression of a disease outbreak, and unprecedented time in the lock down to turn us all into armchair epidemiologists. This includes near real-time sharing and analysis of genomics data through platforms like nextstrain, and of ways to view the infection, mortality and […]
Guest Blog: Data in the time of Coronavirus
Scott Edmunds - February 4, 2020
With much of the GigaScience team spanning the Hong Kong-Shenzhen border and now confined to remote working, the current 2019-novel coronavirus outbreak has been particularly disruptive and close to home. As with previous WHO “public-health emergency of international concern” such as Ebola and Zika, data has provided a potent tool in fighting both the outbreak, and […]
FAIRsharing Guestpost: What Criteria Matters with Data Repository Selection?
Scott Edmunds - November 29, 2019
As part of the FAIRsharing Community Network (see previous blog) and joint Force11 and Research Data Alliance (RDA) FAIRsharing Working Group we have been involved in efforts to develop a shared, cross-publisher list of recommended data deposition repositories. The first fruits of these are a preprint from the working group and DataCite (of which we […]
Harvesting the final fruits of the plant tree of life
Scott Edmunds - October 24, 2019
Lessons learned in the evolution of large-scale data sharing New studies out today elucidate the framework for 1 billion years of green plant evolution. The work are the results of nearly a decades work from an international consortium of nearly 200 plant researchers generating gene sequences from more than 1100 plant species. Here and in […]